Function reference • scMEGA

All functions
`AddTargetAssay()`	Add the TF target expression
`AddTrajectory()`	Add trajectory
`CellPropPlot()`	Plot cell proportion
`CoembedData()`	Integrate data
`CompareCellProp()`	Compare the cell proportion
`CorrelationHeatmap()`	Plot correlation heatmap
`CorrelationPlot()`	Plot correlation
`CreatePairedObject()`	Create paired object
`GRNHeatmap()`	Get a heatmap of TF gene correlation
`GRNPlot()`	Get a graph
`GRNSpatialPlot()`	Plot the target gene in spatial space
`GetCorrelation()`	Get correlation
`GetGRN()`	Get gene regulatory network
`GetPairList()`	Get list of paired cells
`GetTFGeneCorrelation()`	Get TF gene correlation
`GetTrajectory()`	Get data along the trajectory
`NetCentPlot()`	Centric Plot
`PairCells()`	Pair the cells
`PeakToGene()`	Get peak to gene links
`PseudotimePlot()`	Plot dynamic changes along pseudotime trajectory
`RunDiffusionMap()`	Run diffusion map
`SelectGenes()`	Select genes
`SelectTFs()`	Select TFs for GRN inference
`TopEmbGRN()`	PCA of Topological Measures
`TrajectoryHeatmap()`	Plot trajectory heatmap
`TrajectoryPlot()`	Plot trajectory

Reference