Plot cell proportion

This function will generate a bar plot to visualize the cell proportion across different samples

CellPropPlot(object, group.by = NULL, prop.in = NULL, cols = NULL)

Arguments

object

Seurat object

group.by

Name of one metadata column to group the cells

prop.in

Name of one metadata column to compute the cell proportion

cols

Specific colors for plotting

Value

A ggplot object

Examples

library(Seurat)
#> Attaching SeuratObject
data(pbmc_small)
CellPropPlot(
pbmc_small,
group.by = "RNA_snn_res.1",
prop.in = "groups"
)