.CCbyGenes.ArchRProject function — .CCbyGenes.ArchRProject • MOJITOO

Top positive&negative peaks of CCs

Usage

# S3 method for ArchRProject
.CCbyGenes(
  object,
  CCs = 1:3,
  topN = 10,
  RNA.assay = "RNA",
  MOJITOO.reduction = "MOJITOO",
  filter.mito = T,
  filter.ribo = T
)

Arguments

object: ArchRProject object
CCs: CC vector which CCs
topN: topn genes to plot
RNA.assay: RNA assay name
MOJITOO.reduction: mojitoo reduction name
filter.mito: bool if filter mitochondria of genes
filter.ribo: bool if filter ribosome of genes

Examples

.CCbyGenes()
#> Error in .CCbyGenes(): could not find function ".CCbyGenes"