We perform the Fisher test to determine which variants are associated.
This function calls CalculateFisherTestPValue to perform the actual testing.
Usage
VariantWiseFisherTest(
variants_list,
n_cores = 1,
p_value_adjustment = "fdr",
verbose = TRUE
)
Arguments
- variants_list
List of fraction values.
- n_cores
Number of cores you want to use. Numeric.
- p_value_adjustment
Method for P value adjustment. See p.adjust for details.
- verbose
Should the function be verbose? Default = TRUE