VariantFisherTestHeatmap

We generate a heatmap showing the Fisher test of somatic variants with the MT variants. Packages I want to remove.

Usage

VariantFisherTestHeatmap(
  fisher_results,
  patient,
  min_alt_cells = 5,
  min_oddsratio = 1,
  verbose = TRUE
)

Arguments

fisher_results

Data.frame with the correlation results.

patient

The patient for this heatmap.

min_alt_cells

Minimum number of mutated cells needed, otherwise an association will not be plotted.

min_oddsratio

Minimum correlation needed.

verbose

Should the function be verbose? Default = TRUE