SetVariantInfo

We add the genotyping information for a set of variants to a Seurat object. The function returns a Seurat object with the values from the specified assay added as meta data.

Usage

SetVariantInfo(SE, seurat_object, information = "consensus", variants = NULL)

Arguments

SE

SummarizedExperiment object.

seurat_object

The Seurat object.

information

The assay with the desired information. Default: consensus

variants

A vector of variants.