GetVariantInfo

We get the genotyping information for a set of variants. The function returns a matrix with the values from the specified assay.

Usage

GetVariantInfo(SE, information = "consensus", variants = NULL, cells = NULL)

Arguments

SE

SummarizedExperiment object.

information

The assay with the desired information. Default: consensus

variants

A vector of variants.

cells

A vector of cell IDs. On default all cells are returned. Default: NULL