mojitoo function

This function allows you to integrate multi-omics dim-reductions

Usage

mojitoo_Matrix(
  reduction_matrix.list = list(),
  dims.list = list(),
  reduction.name = "mojitoo",
  is.reduction.center = F,
  is.reduction.scale = F,
  fdr.method = "BH",
  corr.pval = 0.05,
  keep_separated_reductions = F
)

mojitoo_Matrix(
  reduction_matrix.list = list(),
  dims.list = list(),
  reduction.name = "mojitoo",
  is.reduction.center = F,
  is.reduction.scale = F,
  fdr.method = "BH",
  corr.pval = 0.05,
  keep_separated_reductions = F
)

Arguments

reduction_matrix.list

reduction list

dims.list

dims vector list

reduction.name

reduction name

is.reduction.center

bool if center the reduction

is.reduction.scale

bool if scale the reduction

fdr.method

fdr method, default BH

keep_separated_reductions

A boolean to keep separated reductions

correlation

test 0.05

Value

mojitoo reduction matrix or list if keep_separated_reductions is TRUE

Examples

mojitoo_Matrix()
#> Error in mojitoo_Matrix(): reduction_matrix.list has to be length >=2!