mojitoo function

This function allows you to integrate multi-omics dim-reductions

Usage

# S3 method for ArchRProject
mojitoo(
  object = NULL,
  reduction.list = list(),
  dims.list = list(),
  reduction.name = "mojitoo",
  is.reduction.center = F,
  is.reduction.scale = F,
  fdr.method = "BH",
  corr.pval = 0.05,
  keep_separated_reductions = F,
  ...
)

Arguments

object

ArchRProjectObject

reduction.list

reduction list

dims.list

dims vector list

reduction.name

reduction name

is.reduction.center

bool if center the reduction

is.reduction.scale

bool if scale the reduction

fdr.method

fdr method, default BH

corr.pval

correlation test 0.05

keep_separated_reductions

bool if keep separated reductions

Examples

mojitoo()
#> Error in mojitoo(): argument "object" is missing, with no default