Transcription Factor API
========================

Import the transcription factor module::

    from intratalkerpy import tf

The transcription factor package is split into concrete submodules:

Analysis
--------

.. automodule:: intratalkerpy.tf.IntraTalker_analysis
    :members:

Significant TFs
---------------

.. automodule:: intratalkerpy.tf.get_significant_TFs
    :members:

Utilities
---------

.. automodule:: intratalkerpy.tf.utils
    :members:

TF Object
---------

.. automodule:: intratalkerpy.tf.tfobject
    :members:

Condition Significance
----------------------

.. automodule:: intratalkerpy.tf.get_condition_significant
    :members:

Network Generation
------------------

.. automodule:: intratalkerpy.tf.generate_intracellular_network
    :members:

Plotting
--------

.. automodule:: intratalkerpy.tf.plot
    :members: