Build deconvolution reference matrix — make_deconv_ref_matrix • CimpleG

Build deconvolution reference matrix

Usage

make_deconv_ref_matrix(cpg_obj, ref_data, ref_data_labels, method = NULL)

Arguments

cpg_obj: A CimpleG object.
ref_data: A matrix with the reference data to be used to build the reference matrix.
ref_data_labels: A character vector with the true labels of the samples in the `reference_data`.
method: Method used to train models in the CimpleG object. If not provided (NULL), method will be taken from the CimpleG object. Creates the old version of the difference in means by sum of variances plot

Value

A list object containing the deconvolution reference matrix